Table 3

Non-aging and non-estrogen-associated probe sets that are differentially expressed in wounds from elderly compared to young subjects

Affy ID
Gene
Gene (description)
Function
q-value*
FC

Downregulated probe sets (10)





     205000_at
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Male fertility-associated RNA helicase
5.9E-13
-78.6
     217521_at
N54942
Transcribed locus
Unknown
1.1E-05
-20.1
     213780_at
TCHH
Trichohyalin
Hair follicle/cornified envelope
1.0E-02
-13.8
     220322_at
IL1F9
interleukin 1 family, member 9
Keratinocyte cytokine
9.7E-04
-9.9
     218454_at
FLJ22662
hypothetical protein FLJ22662
Unknown
1.2E-03
-9.9
     218150_at
ARL5A
ADP-ribosylation factor-like 5A
Developmentally regulated nuclear protein
1.8E-03
-9.0
     205001_s_at
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Male fertility-associated RNA helicase
1.1E-05
-8.6
     214131_at
CYorf15B
chromosome Y open reading frame 15B
X-degenerate gene
1.1E-03
-8.1
     203180_at
ALDH1A3
Aldehyde dehydrogenase 1 family, member A3
Detoxification of aldehydes
7.8E-03
-8.0
     207602_at
TMPRSS11D
transmembrane protease, serine 11D
Psoriasis-associated serine protease
2.3E-04
-7.9






Upregulated probe sets (2)





     213369_at
PCDH21
protocadherin 21
Adhesion
1.3E-05
11.9
     221501_x_at
LOC339047
hypothetical protein LOC339047
Unknown
9.8E-05
9.3

*CyberT-derived multiple testing corrected q-value. Fold change (old/young).

Hardman and Ashcroft Genome Biology 2008 9:R80   doi:10.1186/gb-2008-9-5-r80