Table 2 |
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|
Statistics for ChIP tag differences in the two copies of human SDs |
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| All SDs (n = 25,914) |
Post-macaque SDs (n = 1,646) |
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|
|
|
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| Factors |
Paired t-test p-values |
Wilcoxon signed rank test p-values |
Mean of parental |
Standard deviation of parental |
Mean of derivative |
Standard deviation of derivative |
Paired t-test p-values |
Mean of difference |
Wilcoxon signed rank test p-values |
|
|
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| H2AZ |
3.64E-05 |
2.86E-07 |
1.319 |
2.388 |
1.114 |
1.987 |
5.51E-03 |
0.205 |
1.58E-03 |
| H2BK5me1 |
2.92E-01 |
2.32E-02 |
2.600 |
6.582 |
1.224 |
3.237 |
1.49E-15 |
1.377 |
2.20E-16 |
| H3K27me1 |
2.12E-05 |
5.92E-03 |
2.147 |
2.415 |
1.250 |
1.786 |
2.20E-16 |
0.897 |
2.20E-16 |
| H3K27me2 |
9.71E-10 |
1.74E-11 |
1.526 |
1.670 |
1.355 |
1.668 |
5.60E-04 |
0.170 |
5.08E-05 |
| H3K27me3 |
2.20E-16 |
4.60E-14 |
1.492 |
1.727 |
1.460 |
2.003 |
6.09E-01 |
0.031 |
2.95E-01 |
| H3K36me1 |
1.48E-05 |
2.28E-10 |
1.533 |
1.392 |
1.242 |
1.638 |
8.66E-10 |
0.291 |
2.20E-16 |
| H3K36me3 |
1.29E-02 |
1.57E-05 |
3.755 |
6.347 |
1.796 |
3.027 |
2.20E-16 |
1.959 |
2.20E-16 |
| H3K4me1 |
3.63E-01 |
8.01E-03 |
2.700 |
6.895 |
1.139 |
2.741 |
2.20E-16 |
1.562 |
2.20E-16 |
| H3K4me2 |
8.76E-01 |
9.66E-06 |
1.354 |
2.290 |
0.651 |
1.458 |
2.20E-16 |
0.703 |
2.20E-16 |
| H3K4me3 |
6.68E-01 |
7.46E-11 |
4.144 |
16.473 |
1.987 |
6.256 |
7.06E-07 |
2.157 |
4.44E-16 |
| H3K79me1 |
6.49E-12 |
2.20E-16 |
1.911 |
1.644 |
1.484 |
1.781 |
2.20E-16 |
0.427 |
2.20E-16 |
| H3K79me2 |
3.12E-02 |
1.26E-02 |
0.476 |
0.520 |
0.356 |
0.499 |
1.94E-08 |
0.120 |
3.45E-11 |
| H3K79me3 |
9.62E-04 |
2.06E-06 |
1.823 |
2.595 |
1.671 |
2.941 |
5.76E-02 |
0.153 |
3.76E-05 |
| H3K9me1 |
2.42E-02 |
6.41E-04 |
2.262 |
3.827 |
1.046 |
2.171 |
2.20E-16 |
1.215 |
2.20E-16 |
| H3K9me2 |
1.67E-07 |
3.73E-14 |
1.618 |
1.865 |
1.489 |
1.936 |
1.88E-02 |
0.130 |
5.80E-03 |
| H3K9me3 |
2.40E-03 |
3.90E-06 |
1.380 |
2.323 |
1.357 |
2.357 |
7.25E-01 |
0.023 |
3.61E-01 |
| H3R2me1 |
2.19E-05 |
4.41E-09 |
1.878 |
1.751 |
1.440 |
1.866 |
2.20E-16 |
0.438 |
2.20E-16 |
| H3R2me2 |
4.60E-01 |
4.41E-01 |
1.292 |
1.263 |
1.079 |
1.500 |
1.40E-06 |
0.213 |
1.18E-11 |
| H4K20me1 |
5.72E-04 |
6.77E-05 |
4.865 |
18.476 |
1.257 |
5.664 |
9.85E-13 |
3.608 |
2.20E-16 |
| H4K20me3 |
3.23E-01 |
5.78E-01 |
1.687 |
6.408 |
1.953 |
5.677 |
1.26E-01 |
-0.266 |
2.03E-01 |
| H4R3me2 |
2.16E-01 |
5.43E-01 |
1.439 |
1.404 |
1.165 |
1.666 |
1.91E-10 |
0.275 |
6.66E-16 |
| Pol II |
4.24E-01 |
2.45E-04 |
1.538 |
4.476 |
0.507 |
0.812 |
6.47E-16 |
1.031 |
2.20E-16 |
| CTCF |
9.31E-02 |
6.45E-05 |
0.757 |
1.560 |
0.521 |
1.226 |
1.41E-06 |
0.236 |
2.20E-16 |
| H3K4me3, ES |
0.0008 |
0.294 |
5.673 |
9.20 |
1.423 |
4.89 |
2.30E-06 |
4.25 |
1.91E-10 |
| H3K27me3, ES |
0.0024 |
7.63E-06 |
2.203 |
3.255 |
1.958 |
3.314 |
0.71 |
0.245 |
0.534 |
|
|
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|
The p-values are before adjustment for multiple testing; statistically significant results (by t-test) are in bold. |
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|
Zheng Genome Biology 2008 9:R105 doi:10.1186/gb-2008-9-7-r105 |
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