Taxonomic distribution of large DNA viruses in the sea

Adam Monier , Jean-Michel Claverie and Hiroyuki Ogata

Structural and Genomic Information Laboratory, CNRS-UPR 2589, IFR-88, Université de la Méditerranée Parc Scientifique de Luminy, avenue de Luminy, FR-13288 Marseille, France

author email corresponding author email

Genome Biology 2008, 9:R106doi:10.1186/gb-2008-9-7-r106


Published:	3 July 2008

Subject areas: Bioinformatics, Ecology, Evolution, Virology

Additional files

Additional data file 1:

The IDs and species names of the PolB sequences retrieved from databases are given. Sequences used in the reference multiple alignment are in bold.

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Additional data file 2:

Sequences used in the final reduced reference multiple alignment are displayed with an asterisk.

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Additional data file 3:

The GOS PolB fragments are displayed for each of the 99 branches tested. Numbers in parentheses (V/W) are the total number of mapped PolB fragments (W) and the number of supported cases (V) (displayed in red). Read coverage values are presented as follows: [X-Y]-(Z) where X and Y are the read coverage value range (minimum/maximum) and Z the read coverage median value.

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