Table 3 |
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|
OG1RF-unique regulators |
||||
|
OG1RF |
Description |
Best hit |
Size* |
Comments |
|
|
||||
|
OG1RF_0070 |
Transcriptional regulator |
116512576 |
102 |
- |
|
OG1RF_0073 |
LytR family response regulator |
81428169 |
151 |
- |
|
OG1RF_0120 |
BglG family transcriptional antiterminator |
47095712 |
494 |
Probable regulator of the downstream PTS system |
|
OG1RF_0138 |
Transcriptional regulator |
116493423 |
219 |
Probable transcriptional regulator of the downstream ABC superfamily transporter |
|
OG1RF_0143 |
GntR family transcriptional regulator |
82745913 |
236 |
Probable regulator of the downstream PTS system |
|
OG1RF_0175 |
DNA binding protein |
15890504 |
293 |
Probable regulator of the iol operon |
|
OG1RF_0192 |
Sensor histidine kinase VanSG |
119635646 |
371 |
Best homology with VanG and |
|
OG1RF_0193 |
Response regulator VanRG |
119635645 |
235 |
VanG2 two-component systems. |
|
OG1RF_0192 and OG1RF_0193 appear cotranscribed with a gene encoding a M15 family muramoylpentapeptide carboxypeptidase |
||||
|
OG1RF_0198 |
Response regulator |
47567135 |
240 |
Best homology with AgrA from Bacillus cereus G9241. However, no presence of AgrB or AgrD homologues in the vicinity. Also similar to ComE of S. pneumoniae (52% similarity) |
|
OG1RF_0199 |
Sensor histidine kinase |
47567134 |
443 |
Best homology with AgrC from Bacillus cereus G9241. Also similar to ComD of Streptococcus pneumoniae (48% similarity) |
|
OG1RF_0220 |
Probable endoribonuclease MazF |
69244828 |
114 |
Toxin-antitoxin described in E. |
|
OG1EF_0221 |
Probable antitoxin MazE |
69244829 |
77 |
coli and recently on an E. faecium plasmid |
|
|
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|
*Amino acids |
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|
Bourgogne et al. Genome Biology 2008 9:R110 doi:10.1186/gb-2008-9-7-r110 |
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