Table 1

Correlation of ATH1 and tiling arrays expression values across the analyzed samples

Sample

Description

PCC

Potential tissue-specific transcripts


1

Roots

0.86

378

2

Seedlings

0.88

5

3

Expanding leaves

0.87

13

4

Senescing leaves

0.87

301

5

Stem

0.87

34

6

Vegetative shoot meristem

0.86

19

7

Inflorescence shoot meristem

0.87

14

8

Whole inflorescences

0.85

152

9

Whole inflorescences (clv3-7)

0.86

10

Flowers

0.88

51

11

Fruits

0.86

98


Presented are the correlations for gene expression estimates between ATH1 and tiling array platform, and number of candidates for tissue-specific genes (z score > 2.5 across all samples and most abundant in this tissue) detected in each sample. PCC, Pearson correlation coefficient.

Laubinger et al. Genome Biology 2008 9:R112   doi:10.1186/gb-2008-9-7-r112

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