Genome Biology

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Open Access Research

Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids

Yong-Hwee E Loh1, Lee S Katz1, Meryl C Mims1, Thomas D Kocher2, Soojin V Yi1 and J Todd Streelman1*

Author Affiliations

1 School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia 30332, USA

2 Department of Biology, University of Maryland, College Park, Maryland 20742, USA

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Genome Biology 2008, 9:R113 doi:10.1186/gb-2008-9-7-r113

Published: 10 July 2008

Additional files

Additional data file 1:

Presented is a table of trace sequence statistics of five Lake Malawi cichlid species.

Format: PDF Size: 39KB Download file

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Additional data file 2:

Presented is a list of human gene homologs found in the five cichlid species.

Format: XLS Size: 1.7MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 3:

Presented is a list of alignments and polymorphic sites.

Format: XLS Size: 2.8MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 4:

Presented is a list of alignments with BLAST hits to fish and humans.

Format: XLS Size: 1.6MB Download file

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Additional data file 5:

Presented is a table of major allele frequencies for biallelic SNPs surveyed across Lake Malawi cichlid populations and species.

Format: PDF Size: 39KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data