Research
The transcriptional program underlying the physiology of clostridial sporulation
1 Department of Chemical and Biological Engineering, Northwestern University, Sheridan Road, Evanston, IL 60208-3120, USA
2 Department of Chemical Engineering, University of Delaware, Academy Street, Newark, DE 19716, USA
3 Delaware Biotechnology Institute, University of Delaware, Innovation Way, Newark, DE 19711, USA
4 Current address: Cobalt Biofuels, Clyde Avenue, Mountain View, CA 94043, USA
5 Current address: The Zitter Group, New Montgomery Street, San Francisco, CA 94105, USA
Genome Biology 2008, 9:R114 doi:10.1186/gb-2008-9-7-r114
Published: 16 July 2008Additional files
Additional data file 1:
Comparison of the present microarray study to an earlier microarray study that examined the early sporulation of C. acetobutylicum.
Format: PDF Size: 19KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional data file 2:
COG analysis for each cluster and all the genes placed in each cluster.
Format: XLS Size: 117KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 3:
Transcriptional profiles, in terms of both intensity and differential expression, of specific gene clusters.
Format: PDF Size: 322KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional data file 4:
Includes a brief discussion on how the genes used to construct the deduced activity plots were chosen.
Format: PDF Size: 152KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional data file 5:
Differential expression and intensity of all annotated histidine kinases and response regulators.
Format: PDF Size: 34KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional data file 6:
Phylogenetic tree resulting from the alignment of the σ70-related and unannotated sigma factors from ten bacterial species.
Format: PDF Size: 87KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional data file 7:
Sequences for each asRNA construct.
Format: XLS Size: 28KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 8:
TEM images of the plasmid control strain, asCAP0167, and asCAC1766.
Format: PDF Size: 4.3MB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional data file 9:
Primer sequences used in the Q-RT-PCR experiments.
Format: XLS Size: 26KB Download file
This file can be viewed with: Microsoft Excel Viewer
