Table 4 |
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|
Gene feature length, polymorphism and divergence for sex-specific*, sex-biased*, and unbiased genes |
||||
|
X2 |
p-value† |
Tukey's HSD summary‡ |
Summary§ |
|
|
|
||||
|
Number of genes |
||||
|
Length |
||||
|
EXON |
247.10 |
*** |
Fb≥Fs≥U≥Mb≥Ms |
F>U>M |
|
5'UTR |
133.27 |
*** |
U,Fb≥Mb≥Ms,Fs |
NSS>SS |
|
Intron |
131.81 |
*** |
U≥Mb,Fb,Ms>Fs |
NSS>SS |
|
Number of introns |
64.44 |
*** |
U,Fb≥Mb≥Ms,Fs |
NSS>SS |
|
3'UTR |
236.01 |
*** |
U≥Fb≥Mb>Ms,Fs |
NSS>SS |
|
5' intergenic |
291.9 |
*** |
Ms>Mb,U,Fs≥Fb |
M>F,U |
|
3' intergenic |
274.6 |
*** |
Ms≥Mb≥U,Fb,Fs |
M>F,U |
|
Polymorphism |
||||
|
CPR |
79.64 |
*** |
Fb,Fs,U>Ms,Mb |
F,U>M |
|
5'UTR |
22.14 |
0.0002 |
Ms,Fs≥Fb,Mb≥U |
SS>NSS |
|
Nonsynonymous |
305.11 |
*** |
Ms≥Fs≥Mb≥U,Fb |
SS>NSS |
|
Synonymous |
33.62 |
*** |
Fs,Ms≥Mb≥U,Fb |
SS>NSS |
|
First intron |
59.49 |
*** |
Ms≥Mb≥Fs,U,Fb |
M>F,U |
|
All introns |
48.10 |
*** |
Ms≥Mb≥Fs,Fb,U |
M>F,U |
|
3'UTR |
156.48 |
*** |
Ms≥Mb≥Fs>U>Fb |
M>F,U |
|
Divergence¶ |
||||
|
CPR |
212.79 |
*** |
Fb,Fs>U>Ms,Mb |
F>U>M |
|
5'UTR |
80.02 |
*** |
Fs≥Ms>Fb≥Mb≥U |
SS>NSS |
|
Nonsynonymous |
533.92 |
*** |
Ms>Fs,Mb>Fb,U |
SS>NSS |
|
Synonymous |
81.82 |
*** |
Ms≥Fs,Fb,Mb≥U |
SS>NSS |
|
First intron |
68.47 |
*** |
Ms,Fs≥Mb≥Fb,U |
SS>NSS |
|
All introns |
55.72 |
*** |
Ms≥Fs≥Mb≥Fb,U |
SS>NSS |
|
3'UTR |
259.87 |
*** |
Ms≥Fs≥Mb≥Fb≥U |
SS>NSS |
|
|
||||
|
*Male- and female-specific sets include genes that are expressed only in that sex, whereas sex-biased are expressed, on average, three-fold higher in one sex than the other. †X2 and p-values derived from Kruskal Wallis; three asterisks denote p-value < 0.0001. ‡Ms, male-specific; Mb, male-biased; Fs, female-specific; Fb, female-biased; U, unbiased. §F, female; M, male; U, unbiased; NSS, non-sex-specific; SS, sex-specific. ¶Divergence refers to lineage specific divergence along the D. simulans branch. |
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|
Lawniczak et al. Genome Biology 2008 9:R125 doi:10.1186/gb-2008-9-8-r125 |
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