Table 4

Comparison between the clusters identified in different microarrays

Microarray 1

Microarray 2

Common genes

Common genes in clusters

Common genes in common clusters

Common clusters

Common clusters 3L

Trithorax

ASH2

76 (20%)

17 (27%)

17 (75%)

6 (75%)

4 (100%)

Trithorax

NURF

55 (14%)

10 (17%)

10 (45%)

4 (57%)

3 (75%)

Trithorax

dMyc

43 (12%)

13 (20%)

13 (41%)

6 (100%)

4 (100%)

Trithorax

ASH1

52 (11%)

9 (15%)

9 (38%)

4 (50%)

2 (100%)

Average

14%

20%

50%

71%

94%

Each line contains the following information about the comparison between the trx microarray and a second microarray: number of up- and down-regulated genes reported in common, number of common genes in clusters, number of common genes in common clusters, number of common clusters, number of common clusters in chromosome 3L.

Blanco et al. Genome Biology 2008 9:R134   doi:10.1186/gb-2008-9-9-r134