Table 2 |
|
|
Protein features |
|
|
Protein feature |
Source |
|
|
|
|
Gene names and aliases |
BioGRID [50] 2.0.34 |
|
Amino acid sequences |
Biomart [58] |
|
Paralogs |
|
|
Pfam A/B motifs |
Pfam [31] 21.0 |
|
InterPro [60] 15.0 |
|
|
Prosite [30] motifs |
|
|
SCOP [34] superfamilies |
|
|
GO functional annotations |
GO [35] 05/2007 download |
|
|
|
|
Protein features used to annotate proteins in the built-in data sets provided with NetGrep. |
|
|
Banks et al. Genome Biology 2008 9:R138 doi:10.1186/gb-2008-9-9-r138 |
|
