Table 2

Mean thresholds and accuracy for pseudo/real exon classification (10-fold cross-validation)

Threshold

Accuracy



SRE set

Measure

Mean

SD

Mean

SD


ESEcomb

Exonic density

0.564*

0.000

0.672

0.008

Intronic density

0.450

0.010

0.588

0.010

Exonic relative abundance

0.136*

0.014

0.699

0.009

SRall

Exonic density

0.486*

0.003

0.535

0.006

Intronic density

0.481

0.002

0.585

0.010

Exonic relative abundance

0.163*

0.019

0.580

0.012

ESScomb

Exonic density

0.358

0.017

0.613

0.013

Intronic density

0.492*

0.005

0.614

0.009

Exonic relative abundance

-0.216

0.007

0.707

0.010


*Minimum score cut-off for predicted real exons. Maximum score cut-off for predicted real exons.

Corvelo and Eyras Genome Biology 2008 9:R141   doi:10.1186/gb-2008-9-9-r141

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