Table 3

Comparative results for protein name normalization

Precision

Recall

F1 score


Average

Mean

0.1495

0.2828

0.1707

Standard deviation

0.0963

0.1294

0.0764

Median

0.1337

0.2723

0.1683


Our results

Baseline

0.2223

0.1024

0.1402

+ entry curation

0.2345

0.2648

0.2487

+ organism context

0.3483

0.2410

0.2849


The table shows the comparative results when identifying and normalizing protein names.

Huang et al. Genome Biology 2008 9(Suppl 2):S12   doi:10.1186/gb-2008-9-s2-s12

Open Data