Genome Biology

official impact factor 6.89

This article is part of the supplement: The BioCreative II - Critical Assessment for Information Extraction in Biology Challenge

Open Access

Introducing meta-services for biomedical information extraction

Florian Leitner*, Martin Krallinger, Carlos Rodriguez-Penagos, Jörg Hakenberg, Conrad Plake, Cheng-Ju Kuo, Chun-Nan Hsu, Richard TH Tsai, Hsi-Chuan Hung, William W Lau, Calvin A Johnson, Rune Sætre, Kazuhiro Yoshida, Yan H Chen, Sun Kim, Soo-Yong Shin, Byoung-Tak Zhang, William A Baumgartner, Lawrence Hunter, Barry Haddow, Michael Matthews, Xinglong Wang, Patrick Ruch, Frédéric Ehrler, Arzucan Özgür, Güneş Erkan, Dragomir R Radev, Michael Krauthammer, ThaiBinh Luong, Robert Hoffmann, Chris Sander and Alfonso Valencia*

Genome Biology 2008, 9(Suppl 2):S6 doi:10.1186/gb-2008-9-s2-s6

Accesses  

  • Last 30 days: 87 accesses
  • Last year: 1273 accesses
  • All time: 5168 accesses

Cited by

BioMed Central: 7 citations

Research article   Open Access

U-Compare bio-event meta-service: compatible BioNLP event extraction services

Yoshinobu Kano, Jari Bjorne, Filip Ginter, Tapio Salakoski, Ekaterina Buyko, Udo Hahn, K BRETONNEL Cohen, Karin Verspoor, Christophe Roeder, Lawrence E Hunter, Halil Kilicoglu, Sabine Bergler, Sofie VAN Landeghem, Thomas VAN Parys, Yves VAN DE Peer, Makoto Miwa, Sophia Ananiadou, Mariana Neves, Alberto Pascual-Montano, Arzucan Ozgur, Dragomir R Radev, Sebastian Riedel, Rune Saetre, Hong-Woo Chun, Jin-Dong Kim, Sampo Pyysalo, Tomoko Ohta, Jun'ichi Tsujii BMC Bioinformatics 2011, 12:481 (18 December 2011)

Research   Open Access

Assessment of NER solutions against the first and second CALBC Silver Standard Corpus

Dietrich Rebholz-Schuhmann, Antonio Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B Laurila, Christopher JO Baker, Cheng-Ju Kuo, Simone Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura I Furlong, Michael Rautschka, Mariana Neves, Alberto Pascual-Montano, Qi Wei, Nigel Collier, Md Chowdhury, Alberto Lavelli, Rafael Berlanga, Roser Morante, Vincent Van Asch, Walter Daelemans, José Marina, Erik van Mulligen, Jan Kors, Udo Hahn et al. Journal of Biomedical Semantics 2011, 2(Suppl 5):S11 (6 October 2011)

Research   Open Access

A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature

Anália Lourenço, Michael Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M Rocha BMC Bioinformatics 2011, 12(Suppl 8):S12 (3 October 2011)

Research   Open Access

Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions

Shashank Agarwal, Feifan Liu, Hong Yu BMC Bioinformatics 2011, 12(Suppl 8):S10 (3 October 2011)

Research   Open Access

Overview of the BioCreative III Workshop

Cecilia N Arighi, Zhiyong Lu, Martin Krallinger, Kevin B Cohen, W Wilbur, Alfonso Valencia, Lynette Hirschman, Cathy H Wu BMC Bioinformatics 2011, 12(Suppl 8):S1 (3 October 2011)

Review   Open Access Highly Accessed

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

Toshiaki Katayama, Mark D Wilkinson, Rutger Vos, Takeshi Kawashima, Shuichi Kawashima, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi, Shin Kawano, Jan Aerts, Kiyoko F Aoki-Kinoshita, Kazuharu Arakawa, Bruno Aranda, Raoul JP Bonnal, José M Fernández, Takatomo Fujisawa, Paul MK Gordon, Naohisa Goto, Syed Haider, Todd Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R Kinjo, Fumikazu Konishi, Yulia Kovarskaya et al. Journal of Biomedical Semantics 2011, 2:4 (2 August 2011)

The challenges discussed during the second DBCLS BioHackathon, from data providers, middleware providers, interface designers and end-users perspective.

Research   Open Access

BioDEAL: community generation of biological annotations

Paul Breimyer, Nathan Green, Vinay Kumar, Nagiza F Samatova BMC Medical Informatics and Decision Making 2009, 9(Suppl 1):S5 (3 November 2009)