Table 2

Median APR in a ten-fold cross validation across BP, MF, CC and all the target GO annotations


BP
MF
CC
All GO

Networkfull
0.114
0.388
0.237
0.157
Min
0.108
0.318
0.163
0.145
Mean
0.144
0.431
0.196
0.195
Max
0.119
0.403
0.209
0.165
Classifier
0.088
0.261
0.128
0.119
Networkslim
0.107
0.390
0.207
0.152

The best prediction quality in each column is highlighted in bold. APR, average precision; BP, biological process; CC, cellular component; GO, Gene Ontology; MF, molecular function.

Kim et al. Genome Biology 2008 9(Suppl 1):S5   doi:10.1186/gb-2008-9-s1-s5