|
Pooled performance measures for each category |
||||||
| P01R* |
P05R |
P10R |
P20R |
P50R |
AUC-ROC |
|
|
|
||||||
| BP [3,10] |
0.41 |
0.23 |
0.17 |
0.08 |
0.002 |
0.75 |
| BP [11,30] |
0.41 |
0.28 |
0.22 |
0.14 |
0.01 |
0.79 |
| BP [31,100] |
0.57 |
0.51 |
0.42 |
0.30 |
0.06 |
0.75 |
| BP [101,300] |
0.60 |
0.49 |
0.43 |
0.32 |
0.09 |
0.85 |
| CC [3,10] |
0.78 |
0.43 |
0.45 |
0.24 |
0.02 |
0.85 |
| CC [11,30] |
0.72 |
0.54 |
0.49 |
0.38 |
0.04 |
0.86 |
| CC [31,100] |
0.71 |
0.65 |
0.51 |
0.36 |
0.04 |
0.86 |
| CC [101,300] |
0.92 |
0.72 |
0.59 |
0.46 |
0.12 |
0.87 |
| MF [3,10] |
0.65 |
0.52 |
0.52 |
0.48 |
0.25 |
0.88 |
| MF [11,30] |
0.70 |
0.68 |
0.62 |
0.56 |
0.34 |
0.90 |
| MF [31,100] |
0.84 |
0.74 |
0.66 |
0.60 |
0.43 |
0.93 |
| MF [101,300] |
0.86 |
0.70 |
0.69 |
0.61 |
0.47 |
0.92 |
| Pheno [3,10] |
0.10 |
0.07 |
0.03 |
0.003 |
0.0006 |
0.70 |
| Pheno [11,30] |
0.20 |
0.13 |
0.07 |
0.02 |
0.003 |
0.75 |
| Pheno [31,100] |
0.31 |
0.20 |
0.14 |
0.07 |
0.009 |
0.78 |
| Pheno [101,300] |
0.44 |
0.33 |
0.25 |
0.17 |
0.04 |
0.78 |
|
*P01R is the precision at 1% recall, and the other headers follow this pattern. AUC, area under the curve; BP, biological process; CC, cellular component; MF, molecular function; Pheno, phenotype; ROC, receiver operating characteristic. | ||||||
Taşan et al. Genome Biology 2008 9(Suppl 1):S8 doi:10.1186/gb-2008-9-s1-s8 |
||||||