Table 2

IPS results: summary of results of IPS task, including our three submissions and the central tendency values for all submissions.


PPI all
PPI SP



Precision
Recall
F-score
Precision
Recall
F-score

Run 1






Run 2
0.051
0.275
0.072
0.056
0.285
0.077
Run 3
0.052
0.278
0.073
0.057
0.288
0.078
Meana
0.116
0.2
0.113
0.106
0.186
0.113
StDeva
0.104
0.106
0.084
0.095
0.1
0.084
Mediana
0.081
0.216
0.084
0.076
0.196
0.084

Results are shown for the identification of protein-protein interaction pairs (PPI) for the set of all articles (All) and the subset of articles containing exclusively SwissProt interaction pairs (SP). aCalculated from 45 runs submitted by participating teams.

Abi-Haidar et al. Genome Biology 2008 9(Suppl 2):S11   doi:10.1186/gb-2008-9-s2-s11