Table 2 |
||||||||
|
Summary of tag classification into various categories and comparisons |
||||||||
|
DETs in various comparisons* |
||||||||
|
|
||||||||
|
Category |
Number of DETs† |
E15.5 R versus C |
Adult L versus Ri |
E15.5 versus E17.5 |
E15.5 versus P1.5 |
P1.5 versus Ad |
E versus Ad |
Total |
|
|
||||||||
|
Gene |
386 (68.8) |
25 (56.8) |
10 (58.8) |
24 (63.2) |
16 (44.4) |
114 (59.4) |
253 (77.1) |
442 |
|
EST |
33 (5.9) |
2 (4.5) |
2 (11.8) |
1 (2.6) |
1 (2.8) |
9 (4.7) |
24 (7.3) |
39 |
|
Multiple matches |
55 (9.8) |
9 (20.5) |
3 (17.6) |
5 (13.2) |
4 (11.1) |
21(10.9) |
23 (7.0) |
65 |
|
Ambiguous |
44 (7.8) |
4 (9.1) |
2 (11.8) |
6 (15.8) |
4 (11.1) |
14 (7.3) |
20 (6.1) |
50 |
|
No match |
43 (7.7) |
4 (9.1) |
0 (0) |
2 (5.3) |
11 (30.6) |
34 (17.7) |
8 (2.4) |
59 |
|
Total |
561 |
44 |
17 |
38 |
36 |
192 |
328 |
655 |
|
|
||||||||
|
Tag classification into various categories and comparisons was based on the mouse genome assembly released in July 2007. Values in parentheses represent the 'percentage' across a column. *Total number of tags for various comparisons is 655 (rather than 561) due to the same tag being statistically significant in more than one comparison. †Differentially expressed tags. Ad: adult stage; C: caudal region; E: embryonic day/stage; L: adult left hemisphere; P: postnatal days; R: rostral region; Ri: adult right hemisphere. |
||||||||
|
Ling et al. Genome Biology 2009 10:R104 doi:10.1186/gb-2009-10-10-r104 |
||||||||
