Genome Biology

official impact factor 6.89

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MethMarker: user-friendly design and optimization of gene-specific DNA methylation assays

Peter Schüffler1, Thomas Mikeska2, Andreas Waha3, Thomas Lengauer1 and Christoph Bock1*

Author Affiliations

1 Max-Planck-Institut für Informatik, Campus E1.4, 66123 Saarbrücken, Germany

2 Molecular Pathology Research and Development Laboratory, Department of Pathology, Peter MacCallum Cancer Centre, A'Beckett Street, Melbourne, Victoria 8006, Australia

3 Department of Neuropathology, University of Bonn Medical Centre, Sigmund-Freud-Straße, 53105 Bonn, Germany

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Genome Biology 2009, 10:R105 doi:10.1186/gb-2009-10-10-r105

Published: 5 October 2009

Additional files

Additional data file 1:

Screenshot of MethMarker's performance ranking of DNA methylation assays and candidate biomarkers.

Format: PDF Size: 152KB Download file

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Open Data

Additional data file 2:

The XML-based PMML model that MethMarker uses for exporting, importing and storing candidate biomarkers.

Format: PDF Size: 100KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data