Table 10

Distribution of EST reads and clusters related to cilia/flagella components that also have non-ciliary functions

Number of 1N clusters

Number of 2N clusters

Number of 1N ESTs

Number of 2N ESTs


Tubulins

Alpha-1 tubulin (TUA1, TUA2)

6

2

10

5

Beta-1 tubulin (TUB1, TUB2)

3

1

4

2

Inner dynein arm

Actin, inner dynein arm intermediate chain (IDA5)

7

6

11

13

Caltractin/centrin 20 kDa calcium-binding protein (VFL2)

8

4

13

22

Central pair

Kinesin-like protein 1 (KLP1)

1

0

1

0

Phophatase 1 (PP1a)

3

2

4

8

Intraflagellar transport

Kinesin-II associated protein (KAP1)

1

0

1

0

Cytoplasmic dynein heavy chain 1b (DHC1b)

2

0

7

0

Miscellaneous

Microtubule-associated protein (EB1)

1

1

6

4

Glycogen synthase kinase 3 (GSK3)

2

2

5

12

Calmodulin (CAM)

7

3

19

10

Deflagellation inducible protein, 13KD (DIP13)

0

1

0

1

Heat shock 70 kDa protein (HSP70A)

4

4

11

8

Phototropin, blue light receptor (PHOT)

5/4

2/2

17/15

6/6

Protein phosphatase 2a (PP2A-r2)

0

3

0

3

Proteins found by manual search of Uniprot/Swiss-Prot hits related to eukaryotic flagella and basal body

Flagellar associated protein (A8JAF7_CHLRE)

1

1

6

4

Flagellar associated protein (A8JC09_CHLRE)

1

1

6

1

Totals

52/51

33/33

121/119

99/99


Table is organized as Table 9. Additional data files 7 and 8 contain a detailed analysis.

von Dassow et al. Genome Biology 2009 10:R114   doi:10.1186/gb-2009-10-10-r114

Open Data