Table 8 |
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|
EST clusters without KOG assignment predicted to be highly 2N-specific based on statistical comparison of libraries |
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|
Cluster ID |
Number of 2N ESTs |
P-value |
Homolog ID |
Homolog description |
BLAST |
|
|
|||||
|
GS00092 |
6 |
7 × 10-17 |
*B1X317_CYAA5 |
Putative uncharacterized protein |
7 × 10-17 |
|
GS03351 |
14 |
2 × 10-06 |
*Q0 MYU5_EMIHU |
Putative arachidonate 15-lipoxygenase second type |
2 × 10-06 |
|
GS05210 |
7 |
1 × 10-25 |
*C1AEM4_GEMAT |
Putative glutamine cyclotransferase |
1 × 10-25 |
|
GS01732 |
8 |
1 × 10-19 |
*A7WPV6_KARMI |
Putative uncharacterized protein |
1 × 10-19 |
|
GS02223 |
7 |
1 × 10-31 |
*C1 MGG4_9CHLO |
Predicted protein |
1 × 10-31 |
|
GS05779 |
6 |
2 × 10-17 |
*C1E2K5_9CHLO |
Predicted protein |
2 × 10-17 |
|
GS06362 |
6 |
2 × 10-15 |
*A9V2G5_MONBE |
Predicted protein |
2 × 10-15 |
|
GS00766 |
7 |
3 × 10-07 |
*B7G9 M0_PHATR |
Predicted protein |
3 × 10-07 |
|
GS03302 |
7 |
1 × 10-32 |
*B7G0S2_PHATR |
Predicted protein |
1 × 10-32 |
|
GS03476 |
9 |
2 × 10-09 |
*B7FQM3_PHATR |
Predicted protein |
2 × 10-09 |
|
GS00513 |
8 |
6 × 10-08 |
*Q7V952_PROMM |
Putative uncharacterized protein |
6 × 10-08 |
|
GS01720 |
9 |
8 × 10-06 |
*B2ZYD9_9CAUD |
Nucleoside-diphosphate-sugar pyrophosphorylase-like protein |
8 × 10-06 |
|
GS05985 |
7 |
6 × 10-06 |
*B0J8I4_RHILT |
Putative uncharacterized protein |
6 × 10-06 |
|
GS01421 |
6 |
7 × 10-11 |
*B9S8J5_RICCO |
Putative uncharacterized protein |
7 × 10-11 |
|
GS05596 |
8 |
2 × 10-11 |
*B8 MI73_TALSN |
Putative uncharacterized protein |
2 × 10-11 |
|
GS00659 |
6 |
5 × 10-22 |
*A4VDD7_TETTH |
Putative uncharacterized protein |
5 × 10-22 |
|
GS11002 |
16 |
7.6 × 10-6 |
|||
|
GS02507 |
12 |
1.2 × 10-4 |
|||
|
GS01164 |
10 |
4.9 × 10-4 |
|||
|
GS01802 |
10 |
4.9 × 10-4 |
|||
|
|
|||||
|
Only clusters with zero ESTs originating from the 1N library are shown, and only the orphans confirmed by RT-PCR are included in this table. Homolog IDs are marked as in Table 5. Clusters in bold were chosen for RT-PCR validation (cluster GS11002 is shown in bold italics, the only cluster tested in which abundant RT-PCR product could also be detected from 1N cells). Additional data file 5 gives a complete list of all clusters predicted to be 2N-specific by statistical comparison of libraries. |
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|
von Dassow et al. Genome Biology 2009 10:R114 doi:10.1186/gb-2009-10-10-r114 |
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