Table 2

Hybrid selection-enhanced detection of fusion transcripts

5' Gene

5' Chr.

3' Gene

3' Chr.

Beforea

Aftera


BCR

22

ABL1

9

13

874

NUP214b

9

XKR3b, c

22

9

152

SNHG3-RCC1b, c

1

PICALMb

11

1

39

PRIM1c, d

12

NACAb, d

12

0

22

NCKIPSD d

3

CELSR3c, d

3

0

5

SLC29A1c, d

6

HSP90AB1 d

6

0

2


aNumber of sequence reads before and after hybrid selection. bFusion transcript reads identified from more than one exon in this gene. cNot included in hybrid selection bait genes. dNot previously annotated, read-through transcripts between adjacent genes.

Levin et al. Genome Biology 2009 10:R115   doi:10.1186/gb-2009-10-10-r115

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