Table 2 |
||||
|
TRANSFAC motifs enriched near HighOc sites relative to LowOc and MedOc sites combined |
||||
|
Transcription factor |
TRANSFAC PWM ID |
Fold enrichment |
Fisher P-value |
FDR |
|
|
||||
|
COUPTF |
M01036 |
1.57 |
0 |
0 |
|
HES1 |
M01009 |
1.48 |
0 |
0 |
|
AP-2gamma |
M00470 |
1.35 |
0 |
0 |
|
LXR |
M00647 |
1.31 |
0 |
0 |
|
AP-2 |
M00915 |
1.27 |
0 |
0 |
|
HIC1 |
M01073 |
1.25 |
1.00E-06 |
3.75E-05 |
|
LRF |
M01100 |
1.19 |
0.000128 |
0.00335 |
|
CACCC-binding_factor |
M00721 |
1.26 |
0.000133 |
0.00335 |
|
HIC1 |
M01072 |
1.19 |
0.000134 |
0.00335 |
|
GCM |
M00634 |
1.36 |
0.000231 |
0.005198 |
|
Sp1 |
M00931 |
1.24 |
0.000303 |
0.006198 |
|
CBF_(core_binding_factor) |
M01080 |
1.22 |
0.000868 |
0.016275 |
|
AP-2alphaA |
M01045 |
1.19 |
0.001479 |
0.025598 |
|
ZID |
M00085 |
1.25 |
0.002197 |
0.035309 |
|
YY1 |
M00069 |
1.19 |
0.004876 |
0.07314 |
|
ZF5 |
M00716 |
1.11 |
0.006835 |
0.096117 |
|
|
||||
|
Only the motifs with a false discovery rate (FDR) ≤ 10% are shown. |
||||
|
Essien et al. Genome Biology 2009 10:R131 doi:10.1186/gb-2009-10-11-r131 |
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