Table 1

Experimental parameters for Crossbow experiments using simulated reads from human chromosomes 22 and X

Reference chromosome

Chromosome 22

Chromosome X


Reference base pairs

49.7 million

155 million

Chromosome copy number

Diploid

Haploid

HapMap SNPs introduced

36,096

71,976

Heterozygous

24,761

0

Homozygous

11,335

71,976

Novel SNPs introduced

10,490

30,243

Heterozygous

6,967

0

Homozygous

3,523

30,243

Simulated coverage

40-fold

40-fold

Read type

35-bp paired

35-bp paired


Langmead et al. Genome Biology 2009 10:R134   doi:10.1186/gb-2009-10-11-r134

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