Table 1 |
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|
Experimental parameters for Crossbow experiments using simulated reads from human chromosomes 22 and X |
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|
Reference chromosome |
Chromosome 22 |
Chromosome X |
|
|
||
|
Reference base pairs |
49.7 million |
155 million |
|
Chromosome copy number |
Diploid |
Haploid |
|
HapMap SNPs introduced |
36,096 |
71,976 |
|
Heterozygous |
24,761 |
0 |
|
Homozygous |
11,335 |
71,976 |
|
Novel SNPs introduced |
10,490 |
30,243 |
|
Heterozygous |
6,967 |
0 |
|
Homozygous |
3,523 |
30,243 |
|
Simulated coverage |
40-fold |
40-fold |
|
Read type |
35-bp paired |
35-bp paired |
|
|
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|
Langmead et al. Genome Biology 2009 10:R134 doi:10.1186/gb-2009-10-11-r134 |
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