Table 3 |
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|
The features with the highest correlation to measured S-scores |
|||
|
Number |
Group |
Feature |
Correlation |
|
|
|||
|
1 |
GSG-MATRIX |
GSG-MATRIX #1 |
0.505 |
|
2 |
GSG |
GSG #1 for A |
0.501 |
|
3 |
GSG |
GSG #1 for B |
0.491 |
|
4 |
GSG-MATRIX |
GSG-MATRIX #2 |
0.489 |
|
5 |
GSG-MATRIX |
GSG-MATRIX #3 |
0.419 |
|
6 |
GSG |
GSG #2 for A |
0.417 |
|
7 |
GSG |
GSG #2 for B |
0.412 |
|
8 |
GSG-MATRIX |
GSG-MATRIX #4 |
0.403 |
|
9 |
GSG |
GSG #3 for A |
0.366 |
|
10 |
GSG-MATRIX |
GSG-MATRIX #7 |
0.364 |
|
11 |
GSG |
GSG #3 for B |
0.358 |
|
12 |
GSG-MATRIX |
GSG-MATRIX #8 |
0.341 |
|
13 |
GSG-MATRIX |
GSG-MATRIX #6 |
0.329 |
|
14 |
GSG |
GSG #4 for A |
0.328 |
|
15 |
GSG-MATRIX |
GSG-MATRIX #5 |
0.321 |
|
16 |
GSG-MATRIX |
GSG-MATRIX #13 |
0.319 |
|
17 |
GSG |
GSG #4 for B |
0.310 |
|
18 |
GSG-MATRIX |
GSG-MATRIX #9 |
0.294 |
|
19 |
GSG-MATRIX |
GSG-MATRIX #14 |
0.293 |
|
20 |
GSG |
GSG #5 for A |
0.280 |
|
21 |
GSG |
GSG #5 for B |
0.280 |
|
22 |
GSG-MATRIX |
GSG-MATRIX #12 |
0.271 |
|
23 |
GSG-MATRIX |
GSG-MATRIX #10 |
0.270 |
|
24 |
GSG-MATRIX |
GSG-MATRIX #21 |
0.270 |
|
25 |
GSG-MATRIX |
GSG-MATRIX #11 |
0.264 |
|
26 |
GSG-MATRIX |
GSG-MATRIX #15 |
0.257 |
|
27 |
GSG-MATRIX |
GSG-MATRIX #22 |
0.248 |
|
28 |
GSG-MATRIX |
GSG-MATRIX #16 |
0.242 |
|
29 |
GSG-MATRIX |
GSG-MATRIX #20 |
0.235 |
|
30 |
NETWORK |
SL degree (average of A and B) |
-0.232 |
|
31 |
GSG-MATRIX |
GSG-MATRIX #17 |
0.231 |
|
32 |
GSG-MATRIX |
GSG-MATRIX #23 |
0.227 |
|
33 |
GSG-MATRIX |
GSG-MATRIX #18 |
0.226 |
|
34 |
GSG-MATRIX |
GSG-MATRIX #19 |
0.221 |
|
35 |
GSG-MATRIX |
GSG-MATRIX #24 |
0.207 |
|
36 |
GSG-MATRIX |
GSG-MATRIX #25 |
0.205 |
|
37 |
NETWORK |
2-hop physical-SL |
0.186 |
|
38 |
NETWORK |
SS degree (average of A and B) |
-0.164 |
|
39 |
GENOMIC |
S-score in S. pombe |
0.145 |
|
40 |
NETWORK |
2-hop SL-SL |
0.130 |
|
41 |
NETWORK |
2-hop physical-SS |
0.128 |
|
42 |
NETWORK |
2-hop SS-SS |
0.100 |
|
43 |
NETWORK |
2-hop SL-SS |
0.088 |
|
44 |
GENOMIC |
GO cellular compartment similarity |
-0.064 |
|
45 |
GENOMIC |
Localization: Golgi |
-0.047 |
|
46 |
GENOMIC |
MIPS phenotype: Slow-growth |
-0.045 |
|
47 |
GENOMIC |
Quantitative phenotype correlation |
-0.045 |
|
48 |
GENOMIC |
Localization: microtubule |
-0.039 |
|
49 |
GENOMIC |
GO biological process similarity |
-0.039 |
|
50 |
GENOMIC |
Co-occurrence in any subcellular localization |
0.038 |
|
|
|||
|
The features are sorted by the absolute value of their correlation with measured S-scores. The features are computed between every pair A-B of genes. SL, synthetic lethal; SS, synthetic sick. |
|||
|
Ulitsky et al. Genome Biology 2009 10:R140 doi:10.1186/gb-2009-10-12-r140 |
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