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Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays

Samuel P Hazen15, Felix Naef2, Tom Quisel2, Joshua M Gendron1, Huaming Chen3, Joseph R Ecker3, Justin O Borevitz4 and Steve A Kay1*

Author Affiliations

1 Section of Cell and Developmental Biology, University of California San Diego, Gilman Drive, La Jolla, CA 92093-0130, USA

2 School of Life Science, Ecole Polytechnique Federale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland

3 Plant Biology Laboratory and Genome Analysis Laboratory, The Salk Institute for Biological Studies, N. Torrey Pines Road, La Jolla, CA 92037, USA

4 Department of Evolution and Ecology, University of Chicago, E. 57th Street, Chicago, IL 60637, USA

5 Biology Department, University of Massachusetts, N. Pleasant Street, Amherst, MA 01003, USA

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Genome Biology 2009, 10:R17  doi:10.1186/gb-2009-10-2-r17

Published: 11 February 2009

Additional files

Additional data file 1:

Spectral analysis of each microarray time course.

Format: TXT Size: 103.2MB Download file

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Additional data file 2:

Spectral analysis of each microarray time course.

Format: TXT Size: 103.2MB Download file

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Additional data file 3:

Spectral analysis of a gene array time course with the tiling array time course.

Format: TIFF Size: 5.5MB Download file

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Additional data file 4:

Supplementary tables on the spectral analysis.

Format: XLS Size: 1.3MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 5:

Experimental verification of observations made with the tiling arrays.

Format: TIFF Size: 10MB Download file

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Additional data file 6:

Distributions of the exponential functions from the spectral analysis.

Format: TIFF Size: 5.6MB Download file

Open Data