  MethodUncovering metabolic pathways relevant to phenotypic traits of microbial genomesGabi Kastenmüller1 1 Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München - German Research Center for Environmental Health, Ingolstädter Landstraße, D-85764 Neuherberg, Germany 2 Computer-Chemie-Centrum, Universität Erlangen-Nürnberg, Nägelsbachstraße, D-91052 Erlangen, Germany 3 Molecular Networks GmbH, Henkestraße 91, D-91052 Erlangen, Germany 4 Chair for Genome-oriented Bioinformatics, Technische Universität München, Life and Food Science Center Weihenstephan, Am Forum 1, D-85354 Freising-Weihenstephan, Germany
Genome Biology 2009, 10:R28doi:10.1186/gb-2009-10-3-r28
Subject areas: Bioinformatics, Methods, Microbiology and parasitology Additional filesAdditional data file 1: Completely sequenced genomes included in our analyses and the genomes' phenotypic traits. Format: XLS Size: 73KB Download file This file can be viewed with: Microsoft Excel Viewer Additional data file 2: Classification quality diagrams for all phenotypes and the resulting relevant pathways. Format: PDF Size: 689KB Download file This file can be viewed with: Adobe Acrobat Reader Additional data file 3: The procedure used for evaluating the automatic metabolic reconstruction part of our method and the evaluation results obtained. Format: PDF Size: 300KB Download file This file can be viewed with: Adobe Acrobat Reader |
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