Table 1 |
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|
Enrichment of Gene Ontology biological process terms in ChIP hits with EGR-1 |
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GO term IDs |
Enriched GO terms |
P-value |
|
|
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|
GO:0043170 |
Macromolecule metabolic process |
8.73E-031 |
|
GO:0044238 |
Primary metabolic process |
7.20E-029 |
|
GO:0044237 |
Cellular metabolic process |
8.44E-028 |
|
GO:0043283 |
Biopolymer metabolic process |
4.34E-026 |
|
GO:0006139 |
Nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
6.82E-026 |
|
GO:0006259 |
DNA metabolic process |
7.99E-017 |
|
GO:0010467 |
Gene expression |
2.98E-016 |
|
GO:0015031 |
Protein transport |
3.70E-014 |
|
GO:0016070 |
RNA metabolic process |
1.04E-013 |
|
GO:0016071 |
mRNA metabolic process |
1.16E-013 |
|
GO:0045184 |
Establishment of protein localization |
2.55E-012 |
|
GO:0033036 |
Macromolecule localization |
2.80E-012 |
|
GO:0005654 |
Nucleoplasm |
3.77E-012 |
|
GO:0006396 |
RNA processing |
3.77E-012 |
|
GO:0006281 |
DNA repair |
7.32E-012 |
|
GO:0006886 |
Intracellular protein transport |
7.66E-012 |
|
GO:0008104 |
Protein localization |
4.26E-011 |
|
GO:0006260 |
DNA replication |
4.73E-011 |
|
GO:0016043 |
Cellular component organization and biogenesis |
1.30E-010 |
|
GO:0006974 |
Response to DNA damage stimulus |
1.40E-010 |
|
GO:0006397 |
mRNA processing |
2.05E-009 |
|
GO:0046907 |
Intracellular transport |
3.40E-009 |
|
GO:0008380 |
RNA splicing |
7.02E-009 |
|
GO:0007049 |
Cell cycle |
2.81E-007 |
|
GO:0022613 |
Ribonucleoprotein complex biogenesis and assembly |
9.37E-007 |
|
|
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Kubosaki et al. Genome Biology 2009 10:R41 doi:10.1186/gb-2009-10-4-r41 |
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