Table 1

Enrichment of Gene Ontology biological process terms in ChIP hits with EGR-1

GO term IDs

Enriched GO terms

P-value


GO:0043170

Macromolecule metabolic process

8.73E-031

GO:0044238

Primary metabolic process

7.20E-029

GO:0044237

Cellular metabolic process

8.44E-028

GO:0043283

Biopolymer metabolic process

4.34E-026

GO:0006139

Nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

6.82E-026

GO:0006259

DNA metabolic process

7.99E-017

GO:0010467

Gene expression

2.98E-016

GO:0015031

Protein transport

3.70E-014

GO:0016070

RNA metabolic process

1.04E-013

GO:0016071

mRNA metabolic process

1.16E-013

GO:0045184

Establishment of protein localization

2.55E-012

GO:0033036

Macromolecule localization

2.80E-012

GO:0005654

Nucleoplasm

3.77E-012

GO:0006396

RNA processing

3.77E-012

GO:0006281

DNA repair

7.32E-012

GO:0006886

Intracellular protein transport

7.66E-012

GO:0008104

Protein localization

4.26E-011

GO:0006260

DNA replication

4.73E-011

GO:0016043

Cellular component organization and biogenesis

1.30E-010

GO:0006974

Response to DNA damage stimulus

1.40E-010

GO:0006397

mRNA processing

2.05E-009

GO:0046907

Intracellular transport

3.40E-009

GO:0008380

RNA splicing

7.02E-009

GO:0007049

Cell cycle

2.81E-007

GO:0022613

Ribonucleoprotein complex biogenesis and assembly

9.37E-007


Kubosaki et al. Genome Biology 2009 10:R41   doi:10.1186/gb-2009-10-4-r41

Open Data