Genome Biology

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A whole-genome assembly of the domestic cow, Bos taurus

Aleksey V Zimin, Arthur L Delcher, Liliana Florea, David R Kelley, Michael C Schatz, Daniela Puiu, Finnian Hanrahan, Geo Pertea, Curtis P Van Tassell, Tad S Sonstegard, Guillaume Marçais, Michael Roberts, Poorani Subramanian, James A Yorke and Steven L Salzberg*

Genome Biology 2009, 10:R42 doi:10.1186/gb-2009-10-4-r42

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BioMed Central: 11 citations

Research article   Open Access

Refinement of Bos taurus sequence assembly based on BAC-FISH experiments

Giulia Partipilo, Pietro D'Addabbo, Giovanni M Lacalandra, George E Liu, Mariano Rocchi BMC Genomics 2011, 12:639 (30 December 2011)

Research article   Open Access Highly Accessed

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

Paul Stothard, Jung-Woo Choi, Urmila Basu, Jennifer M Sumner-Thomson, Yan Meng, Xiaoping Liao, Stephen S Moore BMC Genomics 2011, 12:559 (15 November 2011)

Research article   Open Access

Association of an ACSL1 gene variant with polyunsaturated fatty acids in bovine skeletal muscle

Philipp Widmann, Karin Nuernberg, Christa Kuehn, Rosemarie Weikard BMC Genetics 2011, 12:96 (11 November 2011)

Research article   Open Access Highly Accessed

diArk 2.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data

Björn Hammesfahr, Florian Odronitz, Marcel Hellkamp, Martin Kollmar BMC Research Notes 2011, 4:338 (9 September 2011)

Research article   Open Access Highly Accessed

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows

John B Cole, George R Wiggans, Li Ma, Tad S Sonstegard, Thomas J Lawlor, Brian A Crooker, Curtis P Van Tassell, Jing Yang, Shengwen Wang, Lakshmi K Matukumalli, Yang Da BMC Genomics 2011, 12:408 (11 August 2011)

Poster presentation   Free

Genes and genomes, an imperfect world: comparison of gene annotations of two Bos taurus draft assemblies

Liliana Florea, Alexander Souvorov, Steven L Salzberg Genome Biology 2010, 11(Suppl 1):P13 (11 October 2010)

Method   Open Access

Detection and correction of false segmental duplications caused by genome mis-assembly

David R Kelley, Steven L Salzberg Genome Biology 2010, 11:R28 (10 March 2010)

A method for determining false segmental duplications in vertebrate genomes, thus correcting mis-assemblies and providing more accurate estimates of duplications.

Research article   Open Access

Evolution of trappin genes in mammals

Akira Kato, Alejandro P Rooney, Yutaka Furutani, Shigehisa Hirose BMC Evolutionary Biology 2010, 10:31 (29 January 2010)

Research article   Open Access

Characterization of the prohormone complement in cattle using genomic libraries and cleavage prediction approaches

Bruce R Southey, Sandra L Rodriguez-Zas, Jonathan V Sweedler BMC Genomics 2009, 10:228 (16 May 2009)

This article is part of a collection on Bovine: the companion...

Opinion   Free

Back to Bermuda: how is science best served?

Deanna M Church, LaDeana W Hillier Genome Biology 2009, 10:105 (24 April 2009)

Two bovine genome assemblies from the same data suggest it is time to revisit the spirit of the Bermuda and Fort Lauderdale agreements.

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The cattle genome reveals its secrets

David W Burt Journal of Biology 2009, 8:36 (24 April 2009)

Burt discusses the impact of the recently sequenced Bovine genome on our understanding of bovine phylogeny and the genomics of domestication.