Table 2

Polymorphisms on chromosome IV, positions 8,805 to 8,907, where TgCkUg2 and several Ugandan type II strains shared allelic variants with GT1 (type I)

Locus

IV-8


Me49 (II)

T

C

T

A

T

T

G

G

A

G

G

G

A

A

G

T

VEG (III)

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg6

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg5

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg9

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg7

*

*

A

T

C

C

C

*

*

T

*

*

G

C

C

*

TgCkUg1

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

TgCkUg2

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

TgCkUg3

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

TgCkUg8

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

GT1 (I)

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A


Similarities to the Me49 sequence are indicated by an asterisk.

Bontell et al. Genome Biology 2009 10:R53   doi:10.1186/gb-2009-10-5-r53

Open Data