Table 3 |
||||
|
The percentage of cytosine residues that are methylated in CG, CHG or CHH sequence contexts in H3K4me-containing genomic regions* |
||||
|
H3K4me |
Chromosome |
CG |
CHG |
CHH |
|
|
||||
|
H3K4me1 |
1 |
41.78% |
0.41% |
0.32% |
|
2 |
41.52% |
0.42% |
0.31% |
|
|
3 |
40.38% |
0.45% |
0.33% |
|
|
4 |
42.46% |
0.42% |
0.32% |
|
|
5 |
42.03% |
0.40% |
0.30% |
|
|
H3K4me2 |
1 |
4.22% |
0.39% |
0.32% |
|
2 |
4.11% |
0.38% |
0.34% |
|
|
3 |
3.89% |
0.39% |
0.33% |
|
|
4 |
4.78% |
0.36% |
0.33% |
|
|
5 |
4.32% |
0.38% |
0.32% |
|
|
H3K4me3 |
1 |
2.93% |
0.40% |
0.32% |
|
2 |
2.96% |
0.45% |
0.35% |
|
|
3 |
2.85% |
0.39% |
0.32% |
|
|
4 |
3.35% |
0.44% |
0.34% |
|
|
5 |
3.08% |
0.43% |
0.33% |
|
|
|
||||
|
*The genome-wide averages are: CG, 24.0%; CHG, 6.7%; CHH, 1.7%. |
||||
|
Zhang et al. Genome Biology 2009 10:R62 doi:10.1186/gb-2009-10-6-r62 |
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