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The conservation and evolutionary modularity of metabolism

José M Peregrín-Alvarez1,2 email, Chris Sanford1,3 email and John Parkinson1,3,4 email

Program in Molecular Structure and Function, Hospital for Sick Children, College Street, Toronto, ON, M5G 1L7, Canada

Department of Molecular Biology and Biochemistry, University of Malaga, Avda. Cevantes, 29071 Malaga, Spain

Department of Molecular Genetics, University of Toronto, King's College Circle, Toronto, ON, M5S 1A8, Canada

Department of Biochemistry, University of Toronto, Toronto, Kings' College Circle, ON, M5S 1A8, Canada

author email corresponding author email

Genome Biology 2009, 10:R63doi:10.1186/gb-2009-10-6-r63

Published: 12 June 2009

Subject areas: Evolution, Genome studies


Additional files

Additional data file 1:

Supplemental results, discussion, methods and Figures S1-S7.

Format: PDF Size: 367KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional data file 2:

The complete and partial genomes used in this study.

Format: XLS Size: 72KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 3:

Conservation of individual enzymes.

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Additional data file 4:

Enzymes restricted to either bacteria or eukaryotes.

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Additional data file 5:

Conservation of 118 metabolic pathways analyzed in this study.

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Additional data file 6:

Modularity of 166 metabolic pathways analyzed in this study.

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Additional data file 7:

Conservation of 25 regulatory pathways defined by KEGG.

Format: XLS Size: 21KB Download file

This file can be viewed with: Microsoft Excel Viewer


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