Research
Many LINE1 elements contribute to the transcriptome of human somatic cells
Department of Genetics, University of Pennsylvania School of Medicine, Hamilton Walk, Philadelphia, Pennsylvania 19104, USA
Genome Biology 2009, 10:R100 doi:10.1186/gb-2009-10-9-r100
Published: 22 September 2009Additional files
Additional data file 1:
The spreadsheet includes cDNA sequence, L1 assignments, tag counts and related information as indicated in the header.
Format: XLS Size: 66KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 2:
The spreadsheet includes cDNA sequence, L1 assignments, tag counts and related information as indicated in the header.
Format: XLS Size: 50KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 3:
The spreadsheet includes sequences, L1 assignments, counts, and related information.
Format: XLS Size: 116KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 4:
The spreadsheet includes locations, counts, L1 assignments, and other related information. A second worksheet presents this information for tags corresponding to full-length elements only. Grey font indicates 3' truncated elements, green font indicates splicing from greater than 15 kb upstream, while blue font indicates putative non-reference L1s.
Format: XLS Size: 163KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 5:
Oligonucleotides used in this study, as well as sequence corresponding to L1 breakpoint region of a 5' RACE expression tagged site to a non-reference L1.
Format: XLS Size: 28KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 6:
454 5' expression tag pyrosequencing sequence reads and their putative genomic matches.
Format: CSV Size: 2.7MB Download file
