Table 2

The ten transcription factors with the most regulatory effects (highest outgoing connectivity)

Transcription factor

Outgoing connectivity

Gene annotation

GO pathways (level 5)


At4g17695

1254

KAN3 (KANDI 3)

Transcription; regulation of cellular metabolic process

At1g77200

1103

AP2

Transcription; regulation of cellular metabolic process; RNA metabolic process

At2g17040

1100

ANAC036 (Arabidopsis NAC domain containing protein 36)

Transcription; regulation of cellular metabolic process; RNA metabolic process

At5g16560

1100

KAN

Reproductive structure development; regionalization; organ development; cell fate commitment

At2g47900

971

AtTLP3 (tubby like protein 3)

Transcription; regulation of cellular metabolic process

At2g28700

921

AGL46

Transcription; regulation of cellular metabolic process; RNA metabolic process

At5g07690

850

MYB29 (myb domain protein 29)

Transcription; response to gibberellin stimulus; regulation of cellular metabolic process; RNA metabolic process

At4g14920

846

PHD finger

Transcription; regulation of cellular metabolic process; RNA metabolic process

At3g23240

816

ATERF1/ERF1 (ethylene response factor 1)

Response to ethylene stimulus; transcription; regulation of cellular metabolic process; intracellular signaling cascade; two-component signal transduction system; RNA metabolic process

At3g30210

721

MYB121 (myb domain protein 121)

Response to abscisic acid stimulus; transcription; regulation of cellular metabolic process; RNA metabolic process


Carrera et al. Genome Biology 2009 10:R96   doi:10.1186/gb-2009-10-9-r96

Open Data