Table 5 |
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|
Key niche-specific genes in Yersinia |
|||||||||
|
cbi |
pdu |
ttr |
eut |
hyd-2 |
hyd-4 |
ure |
mtn |
opg |
|
|
|
|||||||||
|
Y. enterocolitica |
+ |
+ |
+ |
- |
+ |
+ |
+ |
+ |
+ |
|
Y. aldovae |
+ |
+ |
- |
- |
+ |
+ |
+ |
+ |
+ |
|
Y. bercovieri |
+ |
+ |
+ |
eutABC |
+ |
+ |
+ |
+ |
+ |
|
Y. frederiksenii |
+ |
+ |
+ |
- |
+ |
+ |
+ |
+ |
+ |
|
Y. intermedia |
+ |
+ |
+ |
eutSPQTDMNEJGHABCLKR |
+ |
+ |
+ |
+ |
+ |
|
Y. kristensenii |
+ |
+ |
+ |
- |
+ |
+ |
+ |
+ |
+ |
|
Y. mollaretii |
+ |
+ |
- |
eutABC |
+ |
+ |
+ |
+ |
+ |
|
Y. rohdei |
+ |
- |
+ |
- |
+ |
+ |
+ |
+ |
+ |
|
Y. ruckeri |
- |
- |
- |
- |
+/- hyfABCGHINfdhF |
+/- (hyaD, hypEDB) |
- |
- |
+ |
|
Y. pseudotuberculosis |
- |
- |
- |
- |
- |
- |
+ |
+ |
+ |
|
Y. pestis |
- |
- |
- |
- |
- |
- |
+/- |
- |
- |
|
|
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|
Abbreviations: cbi, cobalamin (vitamin B12) biosynthesis; pdu, 1,2-propanediol utilization; ttr, tetrathionate respiration; eut, ethanolamine degradation; hyd-2 and hyd-4, hydrogenases 2 and 4, respectively; ure, urease; mtn, methionine salvage pathway; opg, osmoprotectant (synthesis of periplasmic branched glucans). |
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|
Chen et al. Genome Biology 2010 11:R1 doi:10.1186/gb-2010-11-1-r1 |
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