Table 1

cDNA library information and sequencing summary

Library

Species

Nature of library

Organ, tissue, or cell line

Total sequences


CBFH

Blue catfish

Normalized

Stomach, muscle, olfactory tissue and trunk kidney

37,314

CBZC

Blue catfish

Normalized

Stomach, muscle, olfactory tissue and trunk kidney

30,902

CBNH

Blue catfish

Normalized

Head kidney, gill, intestine, spleen, skin and liver

9,323

CBZF

Blue catfish

Normalized

Head kidney, gill, intestine, spleen, skin and liver

51,172

Subtotal

128,711

CBCZ

Channel catfish

Non-normalized

Mixed leukocytes of parallel blood leukocytes

16,168

CBFA

Channel catfish

Normalized

Catfish whole fry library

63,602

CBNG

Channel catfish

Normalized

Kidney, gill, intestine, spleen, skin and liver

2,982

CBZB

Channel catfish

Normalized

Kidney, gill, intestine, spleen, skin and liver

57,772

CBNI

Channel catfish

Normalized

Stomach, muscle, olfactory tissue and trunk kidney

17,023

CBZA

Channel catfish

Normalized

Stomach, muscle, olfactory tissue and trunk kidney

61,320

CBPN

Channel catfish

Subtracted

Liver, pituitary, ovary and testis

62,058

CBPO

Channel catfish

Normalized

Peripheral blood leukocytes stimulated with LPS

28,685

Subtotal

309,610

NCBI

Blue catfish

10,764

NCBI

Channel catfish

44,767

Total

493,852


Library names were designated by the Joint Genome Institute. LPS, lipopolysaccharide.

Wang et al. Genome Biology 2010 11:R8   doi:10.1186/gb-2010-11-1-r8

Open Data