Table 3 |
||||
|
Summary of BLASTX search analysis of catfish ESTs |
||||
|
Database |
Catfish hits* |
Unique protein |
% of total unique proteins |
Unique gene |
|
|
||||
|
NR |
41,311 |
22,642 |
||
|
Uniprot |
34,860 |
17,948 |
||
|
Refseq/Ensembl |
||||
|
Zebrafish |
39,546 |
14,988 |
54% of 27,996 |
12,470 |
|
Medaka |
36,641 |
13,588 |
56% of 24,461 |
12,920 |
|
Tetraodon |
34,418 |
13,132 |
57% of 23,118 |
10,322 |
|
Human |
33,847 |
12,621 |
33% of 38,342 |
9,668 |
|
Mouse |
33,594 |
12,267 |
35% of 35,236 |
11,518 |
|
Chicken |
31,646 |
11,059 |
50% of 22,194 |
8,717 |
|
Cumulative unique (E-10)† |
42,668 |
16,439 |
14,776 |
|
|
|
||||
|
*Number of significant (E-10) alignments using all catfish unique sequences as queries to search the listed databases. †Cumulative unique totals were derived from the sum of unique gene/protein identities across all listed species. |
||||
|
Wang et al. Genome Biology 2010 11:R8 doi:10.1186/gb-2010-11-1-r8 |
||||
