Software
The Genomic HyperBrowser: inferential genomics at the sequence level
1 Department of Informatics, University of Oslo, Blindern, 0316 Oslo, Norway
2 Department of Tumor Biology, The Norwegian Radium Hospital, Oslo University Hospital, Montebello, 0310 Oslo, Norway
3 Statistics For Innovation, Norwegian Computing Center, 0314 Oslo, Norway
4 Department of Mathematics, University of Oslo, Blindern, 0316 Oslo, Norway
5 Centre for Cancer Biomedicine, The Norwegian Radium Hospital, Oslo University Hospital, Montebello, 0310 Oslo, Norway
6 Institute for Medical Informatics, The Norwegian Radium Hospital, Oslo University Hospital, Montebello, 0310 Oslo, Norway
7 Department of Biostatistics, Institute of Basic Medical Sciences, University of Oslo, Blindern, 0317 Oslo, Norway
Genome Biology 2010, 11:R121 doi:10.1186/gb-2010-11-12-r121
Published: 23 December 2010Additional files
Additional file 1:
Supplementary material. Miscellaneous supplementary material: gene coverage example. On the importance of realistic null models. On mathematics of genomic tracks. On system architecture. On Exon DNA melting example. Supplementary figures and tables.
Format: DOC Size: 1.1MB Download file
This file can be viewed with: Microsoft Word Viewer
Additional file 2:
Statistical tests. Detailed description of the statistical tests implemented in the software system.
Format: PDF Size: 311KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 3:
Supplementary note on simulation. Description of basic algorithms for simulating synthetic tracks, used to assess statistical tests.
Format: DOC Size: 44KB Download file
This file can be viewed with: Microsoft Word Viewer
