Table 4 |
||||||
|
Number of orthogroups and early eukaryotic duplications identified in analysis III |
||||||
|
NJ-BSa |
ML-BS |
ML-aLRTb |
||||
|
|
|
|
||||
|
≥ 50% |
≥ 70% |
≥ 50% |
≥ 70% |
≥ 50% |
≥ 70% |
|
|
|
||||||
|
Type I orthogroup with duplication |
172 |
93 |
169 |
80 |
334 |
276 |
|
Type I orthogroup total |
508 |
389 |
526 |
380 |
774 |
680 |
|
Type II orthogroup with duplication |
119 |
59 |
102 |
49 |
285 |
301 |
|
Type II orthogroup total |
724 |
597 |
605 |
504 |
581 |
659 |
|
Total orthogroup with duplication |
291 |
152 |
271 |
129 |
619 |
577 |
|
Orthogroup total |
1,232 |
986 |
1,131 |
884 |
1,355 |
1,339 |
|
Percentage |
23.6% |
15.4% |
24.0% |
14.6% |
45.7% |
43.1% |
|
|
||||||
|
Type I orthogroup refers to orthogroups with a prokaryotic outgroup; type II orthogroup refers to orthogroups without a prokaryotic outgroup. aBS, bootstrap test. baLRT, approximate likelihood-ratio test. |
||||||
|
Zhou et al. Genome Biology 2010 11:R38 doi:10.1186/gb-2010-11-4-r38 |
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