Table 1 |
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|
AK043754, AK082072, and AK082467 orthologs among vertebrates |
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|
lncRNA |
Species (common name) |
GenBank accession |
Tissue type |
Dev. stage |
|
|
||||
|
AK043754 |
M. musculus (mouse) |
[Genbank:AK043754]* |
Cortex |
Neonate |
|
R. norvegicus (rat) |
[Genbank:BF565173] |
Brain |
Adult |
|
|
C. jacchus (marmoset) |
[Genbank:EH380404] |
Hippocampus |
Adult |
|
|
H. sapiens (human) |
[Genbank:DB326634] |
Brain |
Fetal |
|
|
B. taurus (cow) |
[Genbank:CO886535] |
Brain |
Adult |
|
|
S. scrofa (pig) |
[Genbank:EW186118] |
Cerebellum |
Fetal |
|
|
T. guttata (zebra finch) |
[Genbank:DV959637] |
Brain |
Pooled |
|
|
AK082072 |
M. musculus (mouse) |
[Genbank:AK082072]* |
Cerebellum |
Neonate |
|
R. norvegicus (rat) |
[Genbank:CB798977] |
Hypothalamus |
Unknown |
|
|
M. fascicularis (macaque) |
[Genbank:CJ466564] |
Parietal lobe |
Adult |
|
|
H. sapiens (human) |
[Genbank:DA317999] |
Hippocampus |
Unknown |
|
|
C. lupus familiaris (dog) |
[Genbank:CO685831] |
Kidney |
Adult |
|
|
B. taurus (cattle) |
[Genbank:DV836210] |
Hypothalamus |
Adult |
|
|
S. scrofa (pig) |
[Genbank:EV900652] |
Cerebellum |
Unknown |
|
|
G. gallus (chicken) |
[Genbank:BU232759] |
Head |
Embryo |
|
|
AK082467/Rmst |
M. musculus (mouse) |
[Genbank:AK082467]* |
Cerebellum |
Neonate |
|
M. musculus (mouse) |
[Genbank:AK086758]* |
Head |
Embryo |
|
|
R. norvegicus (rat) |
[Genbank:BF397583] |
Whole embryo |
Embryo |
|
|
H. sapiens (human) |
[Genbank:DA347802] |
Substantia nigra |
Unknown |
|
|
C. lupus familiaris (dog) |
[Genbank:CO586030] |
Brain |
Adult |
|
|
B. taurus (cow) |
[Genbank:CB447323] |
Pooled |
Unknown |
|
|
S. scrofa (pig) |
[Genbank:BI405055] |
Anterior pituitary |
Adult |
|
|
|
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|
*Sequences used as queries in BLASTN searches against the NCBI nr database to identify orthologous ESTs. The cut-off for significance was set at E-value < 1 ×10-10. |
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|
Chodroff et al. Genome Biology 2010 11:R72 doi:10.1186/gb-2010-11-7-r72 |
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