Table 2

Protein families implicated in plant pathogenesis: P. ultimum versus Phytophthora spp. or diatoms

P. ultimum

Ph. infestans

Ph. sojae

Ph. ramorum

Thalassiosira pseudonana (diatom)

Phaeodactylum tricornutum (diatom)

ABC transporters^a

140

137

141

135

57

65

Aspartyl protease families A1, A8^b

29

16

16

18

ND

8

Crinklers (CRN-family)^a

26

196

100

19

0

0

Cutinase^c

0

4

13

4

0

ND

Cysteine protease families C1, C2, C56^a

42

38

33

42

ND

11

Cytochrome P450s^b

41

28

31

31

ND

10

Elicitin-like proteins^d

24

40

57

50

0

0

Glycoside hydrolases^c

180

277

301

258

59

ND

Lipases^d

31

19

27

17

22

17

NPP1-like proteins (necrosis-inducing proteins)^d

7

27

39

59

0

0

PcF/SCR-like^d

3

16

8

1

0

0

Pectin esterases^c

0

13

19

11

0

ND

Polysaccharide lyases^c

29

67

54

49

0

ND

Phospholipases^d

20

36

31

28

18

11

Protease inhibitors, all^d

43

38

26

18

11

5

RXLR effectors^a

0

563

350

350

0

0

Serine protease families S1A, S8, S10^b

85

60

63

57

ND

31

^aData from manual curation/analyses. ^bData from PANTHER family analyses (MEROPS classification). ^cData from CAZy. ^dData from analysis of TRIBEMCL families. ND, not determined.

Lévesque et al. Genome Biology 2010 11:R73   doi:10.1186/gb-2010-11-7-r73