Research
Intronic motif pairs cooperate across exons to promote pre-mRNA splicing
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* Corresponding author: Lawrence A Chasin lac2@columbia.edu
Department of Biological Sciences, Columbia University, 1212 Amsterdam Ave, MC 2433, New York, NY 10027, USA
Genome Biology 2010, 11:R84 doi:10.1186/gb-2010-11-8-r84
Published: 12 August 2010Additional files
Additional file 1:
Figures S1, S2, and S3, and Tables S1 and S3. Figure S1: distribution of pentamer pairs around constitutive exons. Figure S2: scheme for grouping exons according to the GC content of their flanks. Figure S3: tissue-specific expression of six hnRNPs. Table S1: results with no GC balancing. Table S3: overlap of UpDp downstream motifs with other reported intronic motif sets.
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Additional file 2:
Table S2. List of co-occurring pairs.
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Additional file 3:
Table S4. Tissue-specific expression of genes with co-occurring motif pairs.
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