Table 1 |
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|
Ordered list of Ich mitochondrial genes |
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|
Start |
End |
Accession number |
Product name |
Gene symbol |
T. thermophilaa |
|
|
|||||
|
823 |
742 |
IMG5_M206942 |
tRNA-Tyr-2 |
tRNA-Tyr-2 |
√ |
|
1217 |
941 |
IMG5_M206943 |
LSU rRNA |
rnl_a_1 |
√ |
|
tRNA-Leu |
|||||
|
3687 |
1410 |
IMG5_M206944 |
LSU rRNA |
rnl_b_1 |
√ |
|
5041 |
3695 |
IMG5_M206945 |
Ymf 66 |
ymf66b |
ymf57b |
|
5301 |
4999 |
IMG5_M206946 |
Ymf57 |
ymf57b |
ymf66b |
|
6607 |
5441 |
IMG5_M206947 |
Ymf76 |
ymf76 |
√ |
|
7446 |
6622 |
IMG5_M206948 |
Ribosomal protein S13 |
rps13 |
√ |
|
7903 |
7424 |
IMG5_M206949 |
Ribosomal protein S3 |
rps3 |
√ |
|
8202 |
7903 |
IMG5_M206950 |
Ribosomal protein S19 |
rps19 |
√ |
|
8996 |
8208 |
IMG5_M206951 |
Ribosomal protein L2 |
rpl2 |
√ |
|
9471 |
8977 |
IMG5_M206952 |
Hypothetical protein |
Hypotheticalc |
ymf74 |
|
9961 |
9455 |
IMG5_M206953 |
NADH dehydrogenase subunit 10 |
nad10 |
√ |
|
10381 |
9977 |
IMG5_M206954 |
Ribosomal protein S12 |
rps12 |
√ |
|
10914 |
10393 |
IMG5_M206955 |
NADH dehydrogenase subunit 2 |
nad2 |
√ |
|
10922 |
12214 |
IMG5_M206956 |
NADH dehydrogenase subunit 7 |
nad7 |
√ |
|
12220 |
12522 |
IMG5_M206957 |
Ribosomal protein S14 |
rps14 |
√ |
|
12522 |
13082 |
IMG5_M206958 |
Ymf60 |
ymf60 |
√ |
|
14068 |
13079 |
IMG5_M206959 |
Ymf64 |
ymf64 |
√ |
|
14748 |
14170 |
IMG5_M206960 |
Ymf75 |
ymf75 |
√ |
|
14821 |
14750 |
IMG5_M206961 |
tRNA-Phe-1 |
tRNA-Phe |
√ |
|
nad1_bb |
|||||
|
15055 |
14828 |
IMG5_M206962 |
ATP synthase F0 subunit 9 |
atp9 |
√ |
|
15863 |
15060 |
IMG5_M206963 |
Ymf63 |
ymf63 |
√ |
|
16966 |
15881 |
IMG5_M206964 |
Ymf65 |
ymf65 |
√ |
|
ymf69 |
|||||
|
17653 |
17174 |
IMG5_M206965 |
Ymf59 |
ymf59 |
√ |
|
18096 |
17656 |
IMG5_M206966 |
Ribosomal protein L16 |
rpl16 |
√ |
|
19722 |
18163 |
IMG5_M206967 |
Heme maturase |
yejR |
√ |
|
20433 |
19726 |
IMG5_M206968 |
Ymf61 |
ymf61 |
√ |
|
tRNA-His |
|||||
|
20829 |
20464 |
IMG5_M206969 |
NADH dehydrogenase subunit 3 |
nad3 |
√ |
|
ymf72 |
|||||
|
21193 |
20852 |
IMG5_M206970 |
Ymf58 |
ymf58 |
√ |
|
21795 |
21214 |
IMG5_M206971 |
NADH dehydrogenase subunit 9 |
nad9 |
√ |
|
25990 |
21839 |
IMG5_M206972 |
Ymf77 |
ymf77 |
√ |
|
28327 |
28148 |
IMG5_M206973 |
NADH dehydrogenase subunit 1 |
nad1_bb |
|
|
28510 |
29802 |
IMG5_M206974 |
Apocytochrome b |
cob |
√ |
|
29792 |
31885 |
IMG5_M206975 |
NADH dehydrogenase subunit 5 |
nad5 |
√ |
|
31902 |
33521 |
IMG5_M206976 |
Cytochrome c oxidase subunit 2 |
cox2 |
√ |
|
33532 |
33735 |
IMG5_M206977 |
SSU rRNA |
rns_a |
√ |
|
33783 |
35202 |
IMG5_M206978 |
SSU rRNA |
rns_b |
√ |
|
35555 |
36841 |
IMG5_M206980 |
Ymf67 |
ymf67 |
√ |
|
36862 |
36932 |
IMG5_M206981 |
tRNA-Trp-1 |
tRNA-Trp |
√ |
|
36961 |
38583 |
IMG5_M206982 |
Ymf68 |
ymf68 |
√ |
|
38587 |
38865 |
IMG5_M206983 |
Hypothetical protein |
Hypotheticalc |
ymf71 |
|
38942 |
41014 |
IMG5_M206984 |
Cytochrome c oxidase subunit 1 |
cox1 |
√ |
|
41015 |
41923 |
IMG5_M206985 |
NADH dehydrogenase subunit 1 |
nad1_a |
√ |
|
41847 |
42605 |
IMG5_M206986 |
Ymf62 |
ymf62 |
√ |
|
42627 |
42986 |
IMG5_M206987 |
Ribosomal protein L14 |
rpl14 |
√ |
|
tRNA-Glub |
|||||
|
43012 |
43278 |
IMG5_M206988 |
Ymf70 |
ymf70 |
√ |
|
43284 |
44807 |
IMG5_M206989 |
NADH dehydrogenase subunit 4 |
nad4 |
√ |
|
44811 |
45284 |
IMG5_M206990 |
Ymf73 |
ymf73 |
√ |
|
45323 |
45393 |
IMG5_M206991 |
tRNA-Glu-1 |
tRNA-Glub |
|
|
45404 |
47681 |
IMG5_M206992 |
LSU rRNA |
rnl_b_2 |
√ |
|
tRNA-Leu |
|||||
|
47874 |
48150 |
IMG5_M206993 |
LSU rRNA |
rnl_a_2 |
√ |
|
48267 |
48348 |
IMG5_M206994 |
tRNA-Tyr-1 |
tRNA-Tyr-1 |
tRNA-Met |
|
|
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|
aA checkmark indicates that the T. thermophila mtDNA contains a homolog of the same gene in the same relative position and orientation. bDivergent gene order. c'Hypothetical' indicates insufficient evidence to assign gene name. |
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|
Coyne et al. Genome Biology 2011 12:R100 doi:10.1186/gb-2011-12-10-r100 |
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