Proportion of transcriptome mapping to genome assembly. (a) A histogram showing the number of bases in the transcript assembly that could be mapped to the genome at 98% sequence identity, as a function of transcript length in 300 nt bins. (b) The proportion of transcriptome bases that could be mapped to the genome for the same bins as in (a). The black dashed line indicates the proportion of the transcriptome that is accounted for in the genome assembly.
van Bakel et al. Genome Biology 2011 12:R102 doi:10.1186/gb-2011-12-10-r102