Table 2

Number and distribution of coding region SNPs in the resequenced sorghum genomes

Bona fide genes

Low confidence genes

Transposons

Pseudogenes

Total

Sample

Non-syn

Syn

Non-syn/

Syn

Non-syn

Syn

Non-syn/

Syn

Non-syn

Syn

Non-syn/

Syn

Non-syn

Syn

Non-syn/

Syn

Non-syn/Syn


Ji2731

23,462

18,710

1.25

3,397

1,830

1.86

853

449

1.90

0

0

0.00

1.32

Keller

14,091

10,346

1.36

2,048

1,016

2.02

606

330

1.84

214

164

1.30

1.43

E-Tian

17,781

14,196

1.25

2,386

1,281

1.86

609

374

1.63

314

222

1.41

1.31

Total

38,261

29,625

1.29

5,981

3,113

1.92

1,601

909

1.76

464

327

1.42

1.36


Syn, synonymous.

Zheng et al. Genome Biology 2011 12:R114   doi:10.1186/gb-2011-12-11-r114

Open Data