Table 3 |
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|
Number and distribution of coding region SNPs in Pfam domain-containing genes in the resequenced sorghum genomes |
|||||||||||||
|
Bona fide genes |
Low confidence genes |
Transposons |
Pseudogenes |
Total |
|||||||||
|
Non-syn |
Syn |
Non-syn/ Syn |
Non-syn |
Syn |
Non-syn/ Syn |
Non-syn |
Syn |
Non-syn/ Syn |
Non-syn |
Syn |
Non-syn/ Syn |
Non-syn/Syn |
|
|
|
|||||||||||||
|
Ji2731 |
17,694 |
14,798 |
1.20 |
921 |
567 |
1.62 |
489 |
259 |
1.89 |
0 |
0 |
0.00 |
1.22 |
|
Keller |
10,503 |
8,156 |
1.29 |
560 |
295 |
1.90 |
301 |
173 |
1.74 |
101 |
97 |
1.04 |
1.31 |
|
E-Tian |
13,439 |
11,197 |
1.20 |
600 |
373 |
1.61 |
341 |
219 |
1.56 |
146 |
119 |
1.23 |
1.22 |
|
Total |
28,551 |
23,182 |
1.23 |
1,608 |
965 |
1.67 |
897 |
504 |
1.78 |
209 |
174 |
1.20 |
1.26 |
|
|
|||||||||||||
|
Syn, synonymous. |
|||||||||||||
|
Zheng et al. Genome Biology 2011 12:R114 doi:10.1186/gb-2011-12-11-r114 |
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