Table 3

Number and distribution of coding region SNPs in Pfam domain-containing genes in the resequenced sorghum genomes

Bona fide genes

Low confidence genes

Transposons

Pseudogenes

Total

Non-syn

Syn

Non-syn/

Syn

Non-syn

Syn

Non-syn/

Syn

Non-syn

Syn

Non-syn/

Syn

Non-syn

Syn

Non-syn/

Syn

Non-syn/Syn


Ji2731

17,694

14,798

1.20

921

567

1.62

489

259

1.89

0

0

0.00

1.22

Keller

10,503

8,156

1.29

560

295

1.90

301

173

1.74

101

97

1.04

1.31

E-Tian

13,439

11,197

1.20

600

373

1.61

341

219

1.56

146

119

1.23

1.22

Total

28,551

23,182

1.23

1,608

965

1.67

897

504

1.78

209

174

1.20

1.26


Syn, synonymous.

Zheng et al. Genome Biology 2011 12:R114   doi:10.1186/gb-2011-12-11-r114

Open Data