Table 4 |
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|
Comparison of smORF searches in different eukaryotic organisms |
|||
|
Organism |
smORFs |
Percentage of totala |
Experimentally verifiedb |
|
|
|||
|
Saccharomyces |
299 |
5% |
67% (247) |
|
Arabidopsis |
941 |
5% |
ND |
|
Mus |
1,240 |
5% |
56% (25) |
|
Drosophila |
401 |
3% |
ND |
|
|
|||
|
Comparison of different smORF searches showing the number of smORFs identified in S. cerevisiae [19], A. thaliana [11], M. musculus [28] and D. melanogatser (this study). aThe fraction of smORFs relative to previously annotated protein-coding genes. bThe proportion of smORFs with direct experimental evidence of translation and/or function. Numbers in parentheses are the actual numbers of smORFs tested experimentally. ND, not determined. |
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|
Ladoukakis et al. Genome Biology 2011 12:R118 doi:10.1186/gb-2011-12-11-r118 |
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