Research
RNA-seq in grain unveils fate of neo- and paleopolyploidization events in bread wheat (Triticum aestivum L.)
- † Equal contributors
1 INRA, UMR 1095, Genetics, Diversity and Ecophysiology of Cereals, 234 avenue du Brézet, 63100 Clermont-Ferrand, France
2 INRA, Unité de Recherches en Génomique Végétale, 2 rue Gaston Crémieux, CP 5708, F-91057 Evry Cedex, France
Genome Biology 2011, 12:R119 doi:10.1186/gb-2011-12-12-r119
Published: 2 December 2011Additional files
Additional file 1:
Supplemenraty tables. To support the use of the provided RNA-seq data, we provide eleven supplementary tables. Table S1: RNA-sequence quality and coverage features. Table S2: information on the 37,695 wheat sequence clusters. Table S3: the 17,881 homologs between wheat and Brachypodium/rice/sorghum/maize genomes. Table S4: the heterologous bread wheat expression map. Table S5: the SSCP analysis. Table S6: Brachypodium heat maps. Table S7: GO classification. Table S8: transcription factor data. Table S9: wheat Affymetrix experiment data. Table S10: the starch pathway analysis. Table S11: the structural/functional shuffling model. The provided supplementary tables provide access to the raw data (gene name, sequence, position, function, expression and statistical data) of the results detailed in the article.
Format: ZIP Size: 19.2MB Download file
