Table 3

MMSEQ estimates for H13 and Mcts2 isoforms in F1 hybrid samples. MMSEQ estimates for each haplotype and isoform of H13 and Mcts2 of the initial and reciprocal crosses are shown.

Mother

Father

CASTi

C57r

C57i

CASTr


uc008nfz.1

1.26

1.63

9.61

9.17

uc008nga.1

1.29

3.58

7.68

7.51

uc008ngb.1

12.97

9.81

0.94

0.39

uc008ngc.1

13.63

10.51

1.10

1.08

uc008ngd.1

0.22

0.18

0.30

0.13

uc008nge.1

2.01

4.20

11.29

14.66


The two short isoforms of H13 (uc008nfz.1 and uc008nga.1) were found to be paternally imprinted, while the longer isoforms uc008ngb.1 and uc008ngc.1 were found to be maternally imprinted. The long isoform uc008ngd.1 was estimated to be close to absent. The short Mcts2 gene (uc008nge.1), located within the boundaries of H13, was found to be paternally overexpressed.

Turro et al. Genome Biology 2011 12:R13   doi:10.1186/gb-2011-12-2-r13

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