Additional file 11.
The 3' end of the shorter isoform of h2afx contains the canonical consensus sequence within the 3' UTR of non-polyadenylated histone genes. (a) MEME analysis (Multiple Em for Motif Elicitation) [22,23] revealed the consensus sequence within the 3' UTR regions of histone genes for poly(A)- RNAs. (b) MFold analysis (version 3.5, M Zuker, Rensselaer Polytechnic Institute) predicted the stem-loop structure within the 3' UTR of histone genes for poly(A)- RNAs.
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Yang et al. Genome Biology 2011 12:R16 doi:10.1186/gb-2011-12-2-r16