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Genome-wide assessment of imprinted expression in human cells

Lisanne Morcos1, Bing Ge1, Vonda Koka1, Kevin CL Lam1, Dmitry K Pokholok2, Kevin L Gunderson2, Alexandre Montpetit1, Dominique J Verlaan1* and Tomi Pastinen1*

Author Affiliations

1 McGill University and Genome Quebec Innovation Centre, 740 Dr Penfield Avenue, Montreal, Quebec, H3A 1A4, Canada

2 Illumina Inc., 9885 Towne Centre Drive, San Diego, CA 92121, USA

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Genome Biology 2011, 12:R25  doi:10.1186/gb-2011-12-3-r25

Published: 21 March 2011

Additional files

Additional file 1:

Tables S1, S2, S3, and S4. Tables of loci not imprinted, uninformative loci or of loci used in the validation as well as a description of LCL and fibroblast samples.

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Additional file 2:

Figure S1. Figure demonstrating the correlation of AE between normalized Sanger sequencing and the Illumina array.

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Additional file 3:

Tables S5 and S6. Candidate windows in LCLs and fibroblasts showing high allelic expression.

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Additional file 4:

Figure S2. Figure demonstrating four loci showing imprinted expression.

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